Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE05376.1PFAM: protein of unknown function DUF955; KEGG: chy:CHY_0294 hypothetical protein. (383 aa)    
Predicted Functional Partners:
ACE05375.1
KEGG: chy:CHY_0293 PIN domain protein.
 
    0.949
ruvA
Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
     
  0.693
ACE04483.1
PFAM: UvrD/REP helicase; KEGG: ppg:PputGB1_3118 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
 
  
  0.644
ACE04484.1
KEGG: ppg:PputGB1_3117 hypothetical protein.
 
  
  0.639
ACE03745.1
PFAM: UvrD/REP helicase; KEGG: pvi:Cvib_0501 ATP-dependent DNA helicase PcrA.
     
  0.584
ACE04344.1
PFAM: NERD domain protein; KEGG: aoe:Clos_2030 NERD domain protein.
     
  0.584
ACE05377.1
Hypothetical protein.
       0.400
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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