STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05389.1KEGG: rrs:RoseRS_3563 ATPase (AAA+ superfamily)-like protein. (1115 aa)    
Predicted Functional Partners:
ACE05390.1
PFAM: protein of unknown function DUF1156; KEGG: noc:Noc_0655 protein of unknown function DUF1156.
 
     0.951
ACE05392.1
PFAM: helicase domain protein; KEGG: sat:SYN_00017 superfamily II DNA/RNA helicase, SNF2 family.
 
     0.921
ACE05391.1
PFAM: protein of unknown function DUF1016; KEGG: psp:PSPPH_0603 hypothetical protein.
 
     0.804
ACE05388.1
Hypothetical protein.
       0.697
ACE05386.1
Plasmid maintenance system antidote protein, XRE family; TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: cch:Cag_1194 putative plasmid maintenance system antidote protein, XRE family.
       0.587
ACE05387.1
PFAM: plasmid maintenance system killer; KEGG: cyt:cce_1127 putative killer suppression protein HigA.
       0.587
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.