STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05426.1KEGG: plt:Plut_2120 hypothetical protein. (167 aa)    
Predicted Functional Partners:
cysS
KEGG: plt:Plut_0211 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.697
ACE05427.1
PFAM: Chorismate mutase; KEGG: cch:Cag_0046 chorismate mutase, putative.
 
     0.642
ACE03334.1
KEGG: plt:Plut_1902 hypothetical protein.
  
     0.582
ACE04633.1
PFAM: phosphatidate cytidylyltransferase; protein of unknown function DUF92 transmembrane; KEGG: plt:Plut_0610 membrane protein.
  
     0.581
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
       0.555
ACE05033.1
PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: pvi:Cvib_0361 tRNA/rRNA methyltransferase (SpoU).
 
  
 0.553
ACE05130.1
PFAM: phosphatidate cytidylyltransferase; KEGG: cte:CT1990 hypothetical protein.
  
     0.539
ACE05413.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
     0.518
ACE05078.1
KEGG: cte:CT1907 hypothetical protein.
  
     0.505
ACE03549.1
TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cch:Cag_1731 RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
  
  
 0.494
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.