STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05431.1PFAM: protein of unknown function DUF1232; KEGG: cte:CT2220 hypothetical protein. (155 aa)    
Predicted Functional Partners:
ACE05430.1
PFAM: Rhomboid family protein; KEGG: pvi:Cvib_1767 rhomboid family protein.
       0.764
rpsU
PFAM: ribosomal protein S21; KEGG: plt:Plut_0283 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
     0.600
pgk
PFAM: phosphoglycerate kinase; KEGG: cte:CT2222 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.590
ACE04887.1
KEGG: plt:Plut_1887 hypothetical protein.
  
     0.508
ACE04321.1
KEGG: cte:CT1463 hypothetical protein.
  
     0.462
ACE05432.1
KEGG: bac:BamMC406_4383 hypothetical protein.
       0.462
ACE03463.1
PFAM: peptidase M50; KEGG: pvi:Cvib_1460 peptidase M50.
  
     0.443
ACE04055.1
Anti-sigma-factor antagonist; PFAM: HMG-I and HMG-Y DNA-binding domain protein; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cte:CT0972 anti-anti-sigma factor, putative.
  
     0.426
ACE05078.1
KEGG: cte:CT1907 hypothetical protein.
 
     0.409
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
       0.408
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.