STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05438.1KEGG: ppd:Ppro_1273 hypothetical protein. (127 aa)    
Predicted Functional Partners:
ACE05437.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.849
ACE05442.1
PFAM: restriction modification system DNA specificity domain; KEGG: bld:BLi04316 hypothetical protein.
  
    0.818
ACE05436.1
PFAM: protein of unknown function DUF45; KEGG: pla:Plav_2343 protein of unknown function DUF45.
       0.776
ACE05439.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: dvu:DVU2042 Fic family protein.
       0.776
ACE05440.1
KEGG: nwi:Nwi_3122 hypothetical protein.
       0.753
ACE05441.1
KEGG: ftn:FTN_0708 hypothetical protein.
       0.749
ACE05443.1
KEGG: neu:NE2498 hypothetical protein.
       0.749
ACE03162.1
N-6 DNA methylase; PFAM: restriction modification system DNA specificity domain; putative RNA methylase; N-6 DNA methylase; KEGG: mgi:Mflv_0805 N-6 DNA methylase.
  
    0.703
ACE05444.1
TIGRFAM: type I restriction-modification system, M subunit; PFAM: putative RNA methylase; N-6 DNA methylase; KEGG: mca:MCA1888 type I restriction-modification system, M subunit.
  
    0.634
ACE05446.1
KEGG: mca:MCA1886 hypothetical protein.
  
    0.572
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.