STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05444.1TIGRFAM: type I restriction-modification system, M subunit; PFAM: putative RNA methylase; N-6 DNA methylase; KEGG: mca:MCA1888 type I restriction-modification system, M subunit. (527 aa)    
Predicted Functional Partners:
ACE05446.1
KEGG: mca:MCA1886 hypothetical protein.
 
 0.970
ACE05442.1
PFAM: restriction modification system DNA specificity domain; KEGG: bld:BLi04316 hypothetical protein.
 
 0.960
ACE05437.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.934
ACE03303.1
PFAM: restriction modification system DNA specificity domain; KEGG: pab:PAB2150 type I restriction-modification enzyme, S subunit.
 
 0.922
ACE03306.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.876
ACE05436.1
PFAM: protein of unknown function DUF45; KEGG: pla:Plav_2343 protein of unknown function DUF45.
 
     0.855
ACE03162.1
N-6 DNA methylase; PFAM: restriction modification system DNA specificity domain; putative RNA methylase; N-6 DNA methylase; KEGG: mgi:Mflv_0805 N-6 DNA methylase.
 
0.780
ACE03703.1
KEGG: chu:CHU_2939 probable type I restriction-modification system.
 
 0.730
ACE05438.1
KEGG: ppd:Ppro_1273 hypothetical protein.
  
    0.656
ACE05445.1
KEGG: dvu:DVU2021 hypothetical protein.
       0.626
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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