STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN93393.1ABC-type multidrug transport system, permease component. (357 aa)    
Predicted Functional Partners:
KRN93392.1
ABC-type multidrug transport system, ATPase component.
 
 0.968
KRN93394.1
TetR family transcriptional regulator.
 
     0.956
KRN93700.1
Hypothetical protein.
 
 0.606
KRN95035.1
Aunorubicin resistance ABC superfamily ATP binding cassette transporter efflux permease.
 
 0.566
KRN93708.1
ABC-type polysaccharide polyol phosphate export system, permease component.
    
  0.545
KRN95036.1
ABC-2 domain containing protein.
  
  
  0.500
KRN93701.1
ABC transporter.
 
  
 0.479
KRN94504.1
Multidrug ABC transporter ATPase.
 
 0.426
KRN93391.1
Transcriptional regulator.
  
    0.410
Your Current Organism:
Pediococcus stilesii
NCBI taxonomy Id: 331679
Other names: CCUG 51290, DSM 18001, FAIR-E 180, LMG 23082, LMG:23082, P. stilesii, Pediococcus stilesii Franz et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.