Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KRN94764.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
KRN94765.1
Cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.999
KRN94763.1
Fe-S cluster assembly ABC-type transport system, permease component.
 
  
 0.996
KRN94766.1
FeS assembly protein SufD.
 
  
 0.996
KRN94767.1
Fe-s cluster assembly abc-type transport system, atpase component.
 
  
 0.991
KRN94329.1
Cysteine sulfinate desulfinase cysteine desulfurase.
  
 0.970
KRN94026.1
Cysteine sulfinate desulfinase cysteine desulfurase.
  
 0.970
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.923
KRN93952.1
Hypothetical protein.
   
    0.753
KRN94182.1
BadM Rrf2 family transcriptional regulator.
  
  
 0.646
KRN94768.1
Ribonucleoside-triphosphate reductase class III activase subunit; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
     
 0.612
Your Current Organism:
Pediococcus stilesii
NCBI taxonomy Id: 331679
Other names: CCUG 51290, DSM 18001, FAIR-E 180, LMG 23082, LMG:23082, P. stilesii, Pediococcus stilesii Franz et al. 2006
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