STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP65662.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (357 aa)    
Predicted Functional Partners:
EDP65664.1
COG0477 Permeases of the major facilitator superfamily.
 
     0.849
EDP65661.1
COG3915 Uncharacterized protein conserved in bacteria.
       0.639
EDP65660.1
COG0642 Signal transduction histidine kinase.
 
   
 0.571
EDP65663.1
Transposase, mutator type; COG3328 Transposase and inactivated derivatives.
       0.563
EDP61207.1
Major facilitator superfamily MFS_1.
  
  
 
0.530
EDP63214.1
Putative iron uptake ABC transporter periplasmic solute-binding protein precursor; COG1840 ABC-type Fe3+ transport system, periplasmic component.
 
  
 0.481
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.409
EDP65014.1
Iron ABC transporter iron-binding protein, putative; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
 0.401
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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