STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP65735.1Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase. (715 aa)    
Predicted Functional Partners:
EDP65732.1
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein.
    
 0.839
EDP65736.1
COG2010 Cytochrome c, mono- and diheme variants.
    
 0.825
EDP61445.1
Twin-arginine translocation pathway signal; COG2132 Putative multicopper oxidases.
 
  
 0.794
ribB
Riboflavin biosynthesis protein ribA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.791
EDP66135.1
COG0642 Signal transduction histidine kinase.
  
 
 0.769
EDP66327.1
COG0642 Signal transduction histidine kinase.
  
 
 0.769
EDP64575.1
Copper resistance protein A precursor; COG2132 Putative multicopper oxidases.
 
  
 0.733
EDP65536.1
Adenylate cyclase protein; COG3316 Transposase and inactivated derivatives.
    
 0.715
EDP65583.1
Putative adenylate cyclase transmembrane protein; COG0633 Ferredoxin.
    
 0.715
EDP66578.1
COG2132 Putative multicopper oxidases.
 
  
 0.712
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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