STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP64738.1Hypothetical protein. (446 aa)    
Predicted Functional Partners:
EDP61404.1
Hypothetical protein; COG3424 Predicted naringenin-chalcone synthase.
  
 
 
 0.911
EDP63136.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
 
 
 0.709
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.674
EDP66306.1
Putative phytoene synthase; COG1562 Phytoene/squalene synthetase.
   
 
 0.650
EDP66307.1
2'-deoxycytidine 5'-triphosphate deaminase; COG1562 Phytoene/squalene synthetase.
   
 
 0.650
EDP66313.1
Hypothetical protein; COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
   
 
 0.647
EDP62111.1
Probable acetylpolyamine aminohydrolase; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
    
 0.629
EDP64970.1
Histone deacetylase superfamily protein; COG0456 Acetyltransferases.
    
 0.629
EDP61486.1
Histone deacetylase superfamily protein.
    
 0.629
EDP66242.1
Acetoin utilization protein, putative; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
    
 0.629
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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