Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDP62055.1 | EDP64053.1 | BAL199_09675 | BAL199_05644 | Hypothetical protein; COG1605 Chorismate mutase. | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | 0.459 |
EDP63169.1 | EDP64053.1 | BAL199_30367 | BAL199_05644 | COG0679 Predicted permeases. | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | 0.410 |
EDP63489.1 | EDP64053.1 | BAL199_07148 | BAL199_05644 | OmpA/MotB; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | 0.459 |
EDP63489.1 | EDP64238.1 | BAL199_07148 | BAL199_08453 | OmpA/MotB; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein. | 0.554 |
EDP63489.1 | EDP64384.1 | BAL199_07148 | BAL199_09183 | OmpA/MotB; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein. | 0.450 |
EDP63863.1 | EDP64053.1 | BAL199_14547 | BAL199_05644 | COG1199 Rad3-related DNA helicases. | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | 0.415 |
EDP63863.1 | EDP64238.1 | BAL199_14547 | BAL199_08453 | COG1199 Rad3-related DNA helicases. | Hypothetical protein. | 0.718 |
EDP63863.1 | EDP64384.1 | BAL199_14547 | BAL199_09183 | COG1199 Rad3-related DNA helicases. | Hypothetical protein. | 0.754 |
EDP63863.1 | fliG | BAL199_14547 | BAL199_05654 | COG1199 Rad3-related DNA helicases. | Flagellar motor switch protein G; COG3335 Transposase and inactivated derivatives. | 0.490 |
EDP64052.1 | EDP64053.1 | BAL199_05639 | BAL199_05644 | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | 0.472 |
EDP64053.1 | EDP62055.1 | BAL199_05644 | BAL199_09675 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG1605 Chorismate mutase. | 0.459 |
EDP64053.1 | EDP63169.1 | BAL199_05644 | BAL199_30367 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | COG0679 Predicted permeases. | 0.410 |
EDP64053.1 | EDP63489.1 | BAL199_05644 | BAL199_07148 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | OmpA/MotB; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | 0.459 |
EDP64053.1 | EDP63863.1 | BAL199_05644 | BAL199_14547 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | COG1199 Rad3-related DNA helicases. | 0.415 |
EDP64053.1 | EDP64052.1 | BAL199_05644 | BAL199_05639 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | 0.472 |
EDP64053.1 | EDP64054.1 | BAL199_05644 | BAL199_05649 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | tISRso5; ISRSO5-transposase protein. | 0.554 |
EDP64053.1 | EDP64238.1 | BAL199_05644 | BAL199_08453 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.496 |
EDP64053.1 | EDP64384.1 | BAL199_05644 | BAL199_09183 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.545 |
EDP64053.1 | fliG | BAL199_05644 | BAL199_05654 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Flagellar motor switch protein G; COG3335 Transposase and inactivated derivatives. | 0.879 |
EDP64054.1 | EDP64053.1 | BAL199_05649 | BAL199_05644 | tISRso5; ISRSO5-transposase protein. | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | 0.554 |
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