STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP61278.1Hypothetical protein; COG1695 Predicted transcriptional regulators. (366 aa)    
Predicted Functional Partners:
EDP61277.1
Transcriptional regulator, PadR-like family protein.
       0.608
EDP65829.1
Hypothetical protein; COG4032 Predicted thiamine-pyrophosphate-binding protein.
   
    0.591
EDP64650.1
Hypothetical protein; COG4032 Predicted thiamine-pyrophosphate-binding protein.
   
    0.591
EDP61279.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.566
EDP63592.1
Non-ribosomal peptide synthetase.
  
  
 0.525
EDP61276.1
Putative secreted protein; COG0492 Thioredoxin reductase.
    
  0.501
EDP64326.1
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
 
  0.483
EDP66772.1
Hypothetical protein.
  
     0.466
EDP61842.1
Cyclohexanone monooxygenase; COG2072 Predicted flavoprotein involved in K+ transport.
  
  
  0.464
fliG-2
Flagellar motor switch protein G; COG0457 FOG: TPR repeat.
  
     0.451
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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