STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP62094.1Carbohydrate ABC transporter-2 (CUT2) family, permease protein; COG1079 Uncharacterized ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (314 aa)    
Predicted Functional Partners:
EDP62095.1
Carbohydrate ABC transporter-2 (CUT2) family, permease protein; COG4603 ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
EDP62096.1
ABC transporter component; COG3845 ABC-type uncharacterized transport systems, ATPase components.
 
 0.990
EDP65491.1
COG4603 ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.974
EDP62097.1
Tat (twin-arginine translocation) pathway signal sequence/basic membrane protein.
 
 
 0.967
EDP65493.1
COG3845 ABC-type uncharacterized transport systems, ATPase components.
 
 0.958
EDP65494.1
Putative outer membrane basic protein.
 
 
 0.925
EDP62093.1
COG0402 Cytosine deaminase and related metal-dependent hydrolases.
 
    0.847
EDP65970.1
ABC transporter related protein; COG1129 ABC-type sugar transport system, ATPase component.
  
  0.583
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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