STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP62808.1Hypothetical protein. (396 aa)    
Predicted Functional Partners:
EDP62803.1
Hypothetical protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
     0.915
EDP62806.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
 
     0.901
EDP62807.1
Glucosyltransferase; COG0438 Glycosyltransferase.
 
     0.901
EDP62800.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
     0.900
EDP62798.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
     0.897
EDP62799.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
     0.893
EDP62809.1
ABC transporter, permease protein; COG4671 Predicted glycosyl transferase.
 
     0.880
EDP62812.1
COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 
     0.861
EDP62810.1
Hypothetical protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
     0.857
EDP62805.1
Phosphoglycerate mutase, putative; COG0406 Fructose-2,6-bisphosphatase.
 
     0.841
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.