STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP62167.1Hypothetical protein; COG0177 Predicted EndoIII-related endonuclease. (139 aa)    
Predicted Functional Partners:
EDP62168.1
Hypothetical protein.
 
     0.816
EDP66364.1
Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases.
  
     0.703
EDP65274.1
COG1360 Flagellar motor protein.
  
     0.702
EDP65280.1
Hypothetical protein.
  
     0.698
EDP66028.1
Hypothetical protein; COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
  
     0.678
EDP62058.1
Hypothetical protein; COG0287 Prephenate dehydrogenase.
  
     0.657
EDP61287.1
COG0186 Ribosomal protein S17.
  
     0.641
EDP64733.1
Hypothetical protein; COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32).
  
     0.634
EDP61398.1
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.622
EDP62169.1
COG1664 Integral membrane protein CcmA involved in cell shape determination.
       0.621
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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