STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP65323.1Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (251 aa)    
Predicted Functional Partners:
EDP63592.1
Non-ribosomal peptide synthetase.
  
 0.919
EDP65324.1
Hypothetical protein; COG1893 Ketopantoate reductase.
 
     0.870
EDP65325.1
COG1402 Uncharacterized protein, putative amidase.
 
     0.849
EDP63595.1
Plipastatin synthetase.
  
 0.799
EDP65322.1
Hypothetical protein; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
   
   0.784
EDP65326.1
Transcriptional regulatory protein; COG1846 Transcriptional regulators.
    
  0.777
EDP64283.1
COG0067 Glutamate synthase domain 1.
     
 0.747
EDP64692.1
Excinuclease ABC subunit B; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.692
EDP63246.1
Putative glutamate synthase small subunit; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
    
 0.566
EDP65327.1
Extracellular solute-binding protein, family 5; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
     0.545
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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