STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP62499.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
EDP62498.1
Hypothetical protein.
     0.980
EDP65654.1
COG0642 Signal transduction histidine kinase.
  
 0.883
EDP66127.1
COG0642 Signal transduction histidine kinase.
  
 0.860
EDP63960.1
GGDEF domain protein.
 
 0.809
EDP65459.1
Heat shock protein DnaJ-like protein.
  
     0.773
EDP64274.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
  
     0.771
EDP64835.1
PAS:GGDEF; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
 0.770
EDP63068.1
Hypothetical protein.
  
     0.768
EDP66309.1
tRNA (uracil-5-)-methyltransferase Gid; COG2199 FOG: GGDEF domain.
  
     0.765
EDP65274.1
COG1360 Flagellar motor protein.
  
    0.761
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.