STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP62599.1ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (298 aa)    
Predicted Functional Partners:
EDP62600.1
Allantoate amidohydrolase; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.964
EDP62597.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  0.884
EDP63102.1
Probable oligopeptide atp-binding abc transporter protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.879
EDP62598.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
  0.875
EDP65197.1
ABC transporter permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.850
EDP65047.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.850
EDP65763.1
ABC transporter, membrane spanning protein (dipeptide); COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.849
EDP61437.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.849
EDP62475.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.849
EDP63266.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.849
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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