STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP61539.1Probable transmembrane protein; COG0283 Cytidylate kinase. (89 aa)    
Predicted Functional Partners:
EDP61511.1
Hypothetical protein; COG3293 Transposase and inactivated derivatives.
 
     0.765
EDP62696.1
Hypothetical protein.
 
     0.757
EDP61075.1
COG3108 Uncharacterized protein conserved in bacteria.
 
     0.750
EDP61104.1
Hypothetical protein; COG5525 Bacteriophage tail assembly protein.
 
     0.737
EDP61720.1
Hypothetical protein.
 
     0.736
EDP62733.1
Hypothetical protein; COG1200 RecG-like helicase.
 
     0.736
EDP62019.1
Hypothetical protein.
 
     0.735
EDP62026.1
Hypothetical protein.
  
     0.657
EDP61729.1
Hypothetical protein.
  
     0.653
EDP62664.1
Hypothetical protein.
  
     0.653
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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