STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP67005.1HpcH/HpaI aldolase; COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family. (260 aa)    
Predicted Functional Partners:
EDP62625.1
Putative hydratase; COG3971 2-keto-4-pentenoate hydratase.
 
 
 0.727
EDP64245.1
Putative hydratase; COG3971 2-keto-4-pentenoate hydratase.
 
 
 0.702
EDP61814.1
Putative hydratase; COG3971 2-keto-4-pentenoate hydratase.
 
 
 0.698
EDP65615.1
Sulfate adenylyltransferase subunit 2; COG3971 2-keto-4-pentenoate hydratase.
 
 
 0.694
EDP64003.1
Putative hydratase; COG3971 2-keto-4-pentenoate hydratase.
 
 
 0.663
EDP67004.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
    
  0.628
EDP64111.1
COG3971 2-keto-4-pentenoate hydratase.
  
 
 0.547
EDP67006.1
FAD dependent oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
       0.509
EDP66653.1
Extradiol-type ring-opening dioxygenase.
  
  
 0.408
EDP66664.1
COG3622 Hydroxypyruvate isomerase; Belongs to the hyi family.
     
 0.405
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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