STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP64913.1Putative transmembrane protein. (710 aa)    
Predicted Functional Partners:
EDP64912.1
Hypothetical membrane spanning protein; COG1232 Protoporphyrinogen oxidase.
     0.944
EDP64911.1
FAD dependent oxidoreductase.
 
     0.928
EDP64910.1
NADH-ubiquinone oxidoreductase 39-40 kDa subunit-like protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
 
     0.915
EDP64907.1
ubiA prenyltransferase family protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; Belongs to the UbiA prenyltransferase family.
 
     0.812
EDP64909.1
acetoacetyl-CoA reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.807
EDP64908.1
Hypothetical protein; COG0277 FAD/FMN-containing dehydrogenases.
 
     0.789
EDP66546.1
CAAX amino terminal protease family protein; COG2202 FOG: PAS/PAC domain.
  
     0.772
EDP66102.1
Hypothetical protein; COG2814 Arabinose efflux permease.
  
     0.771
EDP63539.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.770
EDP66908.1
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.770
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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