STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP66088.1Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases. (275 aa)    
Predicted Functional Partners:
EDP63316.1
COG3962 Acetolactate synthase; Belongs to the TPP enzyme family.
 
 
 0.833
EDP66087.1
Acetolactate synthase large subunit; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.
       0.678
EDP66089.1
Probable short chain dehydrogenase.
       0.678
EDP66086.1
Transcriptional regulator, IclR family protein; COG1414 Transcriptional regulator.
       0.623
EDP66246.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
 
 
 0.584
EDP65006.1
Myo-inositol 2-dehydrogenase; COG0673 Predicted dehydrogenases and related proteins.
 
 
 0.581
EDP61496.1
Putative oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
 
 
 0.578
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 
 0.522
EDP62170.1
COG0524 Sugar kinases, ribokinase family.
  
 
 0.522
EDP63973.1
COG0524 Sugar kinases, ribokinase family.
  
 
 0.522
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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