STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP66314.1degT/dnrJ/eryC1/strS family protein; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family. (403 aa)    
Predicted Functional Partners:
EDP61449.1
COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
 
 0.897
EDP64001.1
Polysaccharide biosynthesis protein CapD; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
 
 0.882
EDP66313.1
Hypothetical protein; COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
 
 
 0.870
EDP65404.1
COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.816
EDP61056.1
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.774
EDP66312.1
Hypothetical protein; COG0629 Single-stranded DNA-binding protein.
       0.773
EDP63532.1
Lipopolysaccharide biosynthesis protein; COG0673 Predicted dehydrogenases and related proteins.
 
 
 0.717
EDP63507.1
UDP-glucose/GDP-mannose dehydrogenase family protein; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.684
EDP65732.1
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein.
  
 
 0.667
EDP64203.1
Putative oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
 
 
 0.635
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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