STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP63728.1COG1024 Enoyl-CoA hydratase/carnithine racemase. (265 aa)    
Predicted Functional Partners:
EDP65654.1
COG0642 Signal transduction histidine kinase.
    
 0.918
EDP66127.1
COG0642 Signal transduction histidine kinase.
    
 0.916
EDP65880.1
COG0642 Signal transduction histidine kinase.
    
  0.892
EDP65363.1
COG0642 Signal transduction histidine kinase.
    
  0.892
EDP65261.1
Isocitrate dehydrogenase; COG0642 Signal transduction histidine kinase.
    
 0.881
EDP65890.1
COG0642 Signal transduction histidine kinase.
    
 0.881
EDP64988.1
COG0642 Signal transduction histidine kinase.
    
 0.881
EDP63729.1
Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
 
 0.857
EDP65653.1
Periplasmic sensor hybrid histidine kinase; COG3452 Predicted periplasmic ligand-binding sensor domain.
    
  0.809
EDP65701.1
COG0642 Signal transduction histidine kinase.
    
  0.809
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.