STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP64559.1Hypothetical protein; COG4341 Predicted HD phosphohydrolase. (200 aa)    
Predicted Functional Partners:
EDP64558.1
COG2175 Probable taurine catabolism dioxygenase.
     0.845
EDP61990.1
phytanoyl-CoA dioxygenase family protein, putative; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
 
  
  0.729
EDP64087.1
COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
 
  
  0.716
EDP65034.1
Short chain dehydrogenase; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
 
  
  0.705
EDP64929.1
Phytanoyl-CoA dioxygenase; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
 
  
  0.656
EDP65967.1
phytanoyl-CoA dioxygenase family protein; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
 
  
  0.531
EDP62060.1
Phytanoyl-CoA dioxygenase; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
 
  
  0.490
EDP64557.1
DGPF protein; COG3795 Uncharacterized protein conserved in bacteria.
       0.479
EDP65077.1
Hypothetical protein; COG3239 Fatty acid desaturase.
  
     0.465
EDP62915.1
phytanoyl-CoA dioxygenase family protein; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
 
  
  0.445
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.