STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP64566.1Putative acetyl-CoA synthetase; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases. (552 aa)    
Predicted Functional Partners:
EDP63592.1
Non-ribosomal peptide synthetase.
  
0.996
EDP64565.1
Hypothetical protein; COG0251 Putative translation initiation inhibitor, yjgF family.
 
     0.937
EDP64564.1
COG0824 Predicted thioesterase.
 
    0.933
EDP64875.1
Tungsten-containing formate dehydrogenase beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
    
 
 0.930
EDP64568.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.929
EDP64571.1
enoyl-CoA hydratase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
 0.929
EDP63595.1
Plipastatin synthetase.
 
0.906
EDP64569.1
Transcriptional regulatory protein; COG1846 Transcriptional regulators.
 
     0.904
EDP64567.1
Hypothetical protein; COG1960 Acyl-CoA dehydrogenases.
 
 
  0.871
EDP64570.1
Probable short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.827
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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