STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP63261.1COG0859 ADP-heptose:LPS heptosyltransferase. (347 aa)    
Predicted Functional Partners:
EDP63260.1
COG3307 Lipid A core - O-antigen ligase and related enzymes.
 
 
 0.883
EDP63262.1
COG2365 Protein tyrosine/serine phosphatase.
  
   0.872
EDP63515.1
Cytidyltransferase-related domain; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.798
hldE
D-beta-D-heptose 1-phosphate adenylyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.780
EDP63263.1
Hypothetical protein; COG2207 AraC-type DNA-binding domain-containing proteins.
       0.773
EDP63264.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
       0.746
EDP63519.1
Sugar isomerase family protein; COG0279 Phosphoheptose isomerase.
 
  
 0.706
EDP64221.1
COG0279 Phosphoheptose isomerase.
 
  
 0.694
EDP63258.1
COG1560 Lauroyl/myristoyl acyltransferase.
 
  
 0.691
EDP63518.1
Histidinol-phosphate phosphatase family protein; COG0241 Histidinol phosphatase and related phosphatases.
 
  
 0.683
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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