STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP63276.1Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (272 aa)    
Predicted Functional Partners:
EDP63275.1
COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
       0.757
EDP63277.1
Polysaccharide deacetylase.
       0.711
EDP66775.1
GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.710
EDP63280.1
COG4126 Hydantoin racemase.
 
     0.613
EDP63279.1
Polysaccharide deacetylase family protein, putative; COG0726 Predicted xylanase/chitin deacetylase.
       0.544
EDP63281.1
DctM (C4-dicarboxylate permease, large subunit); COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
       0.515
EDP63282.1
DctQ (C4-dicarboxylate permease, small subunit); COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
       0.515
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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