STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP62360.1Hypothetical protein. (207 aa)    
Predicted Functional Partners:
EDP63592.1
Non-ribosomal peptide synthetase.
 
  
 0.864
EDP62356.1
Dimethylglycine dehydrogenase; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
  
 0.674
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.656
EDP64907.1
ubiA prenyltransferase family protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; Belongs to the UbiA prenyltransferase family.
   
 0.653
EDP62359.1
Hypothetical protein; COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
       0.620
EDP62358.1
MmgE/PrpD; COG2079 Uncharacterized protein involved in propionate catabolism.
 
     0.555
EDP65956.1
Putative transmembrane phospholipase protein; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
    
 0.554
EDP63472.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
  
  
 0.509
EDP63151.1
COG2124 Cytochrome P450.
    
 0.496
EDP64927.1
Sarcosine dehydrogenase; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
  
  
 0.491
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.