STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP63165.1Transcriptional regulator, Fur family protein; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family. (182 aa)    
Predicted Functional Partners:
znuC
ABC transporter related protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
 0.914
EDP64283.1
COG0067 Glutamate synthase domain 1.
    
 0.894
lipB
Lipoyltransferase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.878
EDP63166.1
COG0523 Putative GTPases (G3E family).
  
  
 0.810
EDP64266.1
COG0450 Peroxiredoxin.
  
  
 0.681
EDP65844.1
Periplasmic solute binding protein; COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin.
 
  
 0.666
EDP65842.1
ABC-3 protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 
  
 0.650
EDP64476.1
O-acetylhomoserine/O-acetylserine sulfhydrylase; COG1832 Predicted CoA-binding protein.
  
    0.637
EDP65609.1
Hypothetical protein; COG2345 Predicted transcriptional regulator.
  
    0.581
EDP64506.1
Probable L-2-amino-thiazoline-4-carboxylic acid hydrolase; COG0471 Di- and tricarboxylate transporters.
  
    0.581
Your Current Organism:
alpha proteobacterium BAL199
NCBI taxonomy Id: 331869
Other names: a. proteobacterium BAL199
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