STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_11554Vegetative incompatibility protein HET-E-1. (1307 aa)    
Predicted Functional Partners:
VFPFJ_04879
U4/U6 small nuclear ribonucleoprotein.
   
 0.685
PCL_02905
Pre-mRNA splicing factor.
   
 0.591
VFPFJ_10053
Elongation factor 2.
   
 0.567
PCL_06097
Pre-mRNA splicing factor.
   
 0.557
VFPFJ_08235
Small nuclear ribonucleoprotein Sm D3.
   
  0.549
VFPFJ_04810
Pre-mRNA processing splicing factor 8.
    
 0.544
VFPFJ_03404
Activating signal cointegrator 1 complex subunit 3.
    
 0.544
VFPBJ_02461
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.529
PCL_01245
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.527
VFPFJ_06980
DNA binding protein SART-1.
    
 0.525
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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