Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PCL_00745 | PCL_03880 | A0A179H6A0 | A0A179HWC5 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. | Argininosuccinate lyase. | 0.760 |
| PCL_00745 | PCL_11694 | A0A179H6A0 | A0A179HXD5 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. | Ornithine aminotransferase. | 0.827 |
| PCL_00745 | VFPBJ_10649 | A0A179H6A0 | A0A179G341 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. | Arginase; Belongs to the arginase family. | 0.917 |
| PCL_00745 | VFPFJ_06506 | A0A179H6A0 | A0A179HL33 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. | Ureohydrolase; Belongs to the arginase family. | 0.917 |
| PCL_00745 | VFPFJ_06572 | A0A179H6A0 | A0A179HD37 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.620 |
| PCL_00745 | VFPFJ_06982 | A0A179H6A0 | A0A179HE68 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. | Ornithine carbamoyltransferase, mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.988 |
| PCL_00745 | VFPFJ_10335 | A0A179H6A0 | A0A179GKE0 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. | Acetylornithine deacetylase. | 0.941 |
| PCL_03880 | PCL_00745 | A0A179HWC5 | A0A179H6A0 | Argininosuccinate lyase. | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. | 0.760 |
| PCL_03880 | PCL_11694 | A0A179HWC5 | A0A179HXD5 | Argininosuccinate lyase. | Ornithine aminotransferase. | 0.759 |
| PCL_03880 | VFPBJ_10649 | A0A179HWC5 | A0A179G341 | Argininosuccinate lyase. | Arginase; Belongs to the arginase family. | 0.907 |
| PCL_03880 | VFPFJ_06506 | A0A179HWC5 | A0A179HL33 | Argininosuccinate lyase. | Ureohydrolase; Belongs to the arginase family. | 0.907 |
| PCL_03880 | VFPFJ_06572 | A0A179HWC5 | A0A179HD37 | Argininosuccinate lyase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.448 |
| PCL_03880 | VFPFJ_06982 | A0A179HWC5 | A0A179HE68 | Argininosuccinate lyase. | Ornithine carbamoyltransferase, mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.896 |
| PCL_11694 | PCL_00745 | A0A179HXD5 | A0A179H6A0 | Ornithine aminotransferase. | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. | 0.827 |
| PCL_11694 | PCL_03880 | A0A179HXD5 | A0A179HWC5 | Ornithine aminotransferase. | Argininosuccinate lyase. | 0.759 |
| PCL_11694 | VFPBJ_10649 | A0A179HXD5 | A0A179G341 | Ornithine aminotransferase. | Arginase; Belongs to the arginase family. | 0.988 |
| PCL_11694 | VFPFJ_06506 | A0A179HXD5 | A0A179HL33 | Ornithine aminotransferase. | Ureohydrolase; Belongs to the arginase family. | 0.988 |
| PCL_11694 | VFPFJ_06572 | A0A179HXD5 | A0A179HD37 | Ornithine aminotransferase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.973 |
| PCL_11694 | VFPFJ_06982 | A0A179HXD5 | A0A179HE68 | Ornithine aminotransferase. | Ornithine carbamoyltransferase, mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.940 |
| VFPBJ_08631 | VFPBJ_10649 | A0A179GFX4 | A0A179G341 | Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | Arginase; Belongs to the arginase family. | 0.902 |
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