STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPBJ_08369COP9 signalosome complex subunit 12. (456 aa)    
Predicted Functional Partners:
PCL_04643
SAC3/GANP domain-containingprotein.
   
 
 0.940
VFPFJ_07906
GANP/Nin1/mts3/eIF-3 p25 family protein.
   
 
 0.898
VFPFJ_02671
Ef-hand 2.
    
 
 0.714
VFPFJ_03256
DNA binding domain with preference for A/T rich regions-like protein.
   
 
 0.667
VFPBJ_02378
Poly(A)+ RNA export protein.
   
  
 0.635
VFPBJ_10646
26S proteasome non-ATPase regulatory subunit 3.
      
 0.519
VFPFJ_11096
Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
    
 
 0.503
VFPFJ_07843
Calmodulin.
    
 
 0.503
PCL_08043
Histone acetyltransferase subunit (Yaf9).
    
 
 0.467
PCL_04734
Phosphoserine phosphatase.
      
 0.447
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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