Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_08138 | PCL_11694 | A0A179HG31 | A0A179HXD5 | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | Ornithine aminotransferase. | 0.782 |
PCL_08138 | VFPBJ_03309 | A0A179HG31 | A0A179HFB3 | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | Glutamate 5-kinase. | 0.664 |
PCL_08138 | VFPFJ_00302 | A0A179HG31 | A0A179HXY8 | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.928 |
PCL_08138 | VFPFJ_01789 | A0A179HG31 | A0A179HSU1 | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.981 |
PCL_08138 | VFPFJ_08560 | A0A179HG31 | A0A179GXS0 | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | Gamma-glutamyl phosphate reductase. | 0.705 |
PCL_08138 | VFPFJ_10588 | A0A179HG31 | A0A179GG54 | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.944 |
PCL_08138 | VFPFJ_10589 | A0A179HG31 | A0A179GG28 | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.964 |
PCL_11694 | PCL_08138 | A0A179HXD5 | A0A179HG31 | Ornithine aminotransferase. | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | 0.782 |
PCL_11694 | VFPBJ_03309 | A0A179HXD5 | A0A179HFB3 | Ornithine aminotransferase. | Glutamate 5-kinase. | 0.955 |
PCL_11694 | VFPBJ_07149 | A0A179HXD5 | A0A179HUU8 | Ornithine aminotransferase. | NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.513 |
PCL_11694 | VFPFJ_00302 | A0A179HXD5 | A0A179HXY8 | Ornithine aminotransferase. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.483 |
PCL_11694 | VFPFJ_01789 | A0A179HXD5 | A0A179HSU1 | Ornithine aminotransferase. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.483 |
PCL_11694 | VFPFJ_08560 | A0A179HXD5 | A0A179GXS0 | Ornithine aminotransferase. | Gamma-glutamyl phosphate reductase. | 0.760 |
PCL_11694 | VFPFJ_10588 | A0A179HXD5 | A0A179GG54 | Ornithine aminotransferase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.944 |
PCL_11694 | VFPFJ_10589 | A0A179HXD5 | A0A179GG28 | Ornithine aminotransferase. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.483 |
VFPBJ_03309 | PCL_08138 | A0A179HFB3 | A0A179HG31 | Glutamate 5-kinase. | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | 0.664 |
VFPBJ_03309 | PCL_11694 | A0A179HFB3 | A0A179HXD5 | Glutamate 5-kinase. | Ornithine aminotransferase. | 0.955 |
VFPBJ_03309 | VFPBJ_07149 | A0A179HFB3 | A0A179HUU8 | Glutamate 5-kinase. | NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.638 |
VFPBJ_03309 | VFPFJ_08560 | A0A179HFB3 | A0A179GXS0 | Glutamate 5-kinase. | Gamma-glutamyl phosphate reductase. | 0.999 |
VFPBJ_03309 | VFPFJ_10588 | A0A179HFB3 | A0A179GG54 | Glutamate 5-kinase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.946 |
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