STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPBJ_07769DEAH-box RNA helicase. (1203 aa)    
Predicted Functional Partners:
VFPFJ_02805
Small nucleolar ribonucleoprotein complex subunit Utp14.
   
 0.999
VFPFJ_05330
rRNA maturation protein.
 
 
 0.997
VFPFJ_05210
Nucleolar complex protein.
   
 0.995
VFPFJ_01305
Sas10/Utp3 family protein.
   
 0.995
VFPFJ_07801
Periodic tryptophan protein 2.
   
 
 0.993
VFPBJ_10216
mRNA-nucleus export ATPase (Elf1).
   
 
 0.992
VFPBJ_01921
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.992
VFPFJ_09983
Small nucleolar ribonucleoprotein complex subunit.
   
 0.991
VFPFJ_02243
U3 small nucleolar RNA-associated protein 22.
   
 0.991
PCL_06595
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
 0.990
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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