Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_06034 | PCL_07312 | A0A179H035 | A0A179GUS7 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | GTP-binding protein. | 0.888 |
PCL_06034 | PCL_08249 | A0A179H035 | A0A179HHE2 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.695 |
PCL_06034 | PCL_09974 | A0A179H035 | A0A179GL40 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Ribosomal protein L24e. | 0.918 |
PCL_06034 | PCL_12726 | A0A179H035 | A0A179HXU8 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.992 |
PCL_06034 | VFPBJ_04248 | A0A179H035 | A0A179GUU9 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Brix domain-containing protein-like protein. | 0.928 |
PCL_06034 | VFPBJ_08329 | A0A179H035 | A0A179H159 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.993 |
PCL_06034 | VFPFJ_05479 | A0A179H035 | A0A179HHX7 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Curved DNA-binding protein. | 0.986 |
PCL_06034 | VFPFJ_07257 | A0A179H035 | A0A179HFR1 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.988 |
PCL_06034 | VFPFJ_10305 | A0A179H035 | A0A179GKB1 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Rsa4p. | 0.990 |
PCL_07312 | PCL_06034 | A0A179GUS7 | A0A179H035 | GTP-binding protein. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.888 |
PCL_07312 | PCL_08249 | A0A179GUS7 | A0A179HHE2 | GTP-binding protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.997 |
PCL_07312 | PCL_09974 | A0A179GUS7 | A0A179GL40 | GTP-binding protein. | Ribosomal protein L24e. | 0.984 |
PCL_07312 | PCL_12726 | A0A179GUS7 | A0A179HXU8 | GTP-binding protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
PCL_07312 | VFPBJ_04248 | A0A179GUS7 | A0A179GUU9 | GTP-binding protein. | Brix domain-containing protein-like protein. | 0.994 |
PCL_07312 | VFPBJ_08329 | A0A179GUS7 | A0A179H159 | GTP-binding protein. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.998 |
PCL_07312 | VFPBJ_11032 | A0A179GUS7 | A0A179FPY6 | GTP-binding protein. | WD domain-containing protein. | 0.961 |
PCL_07312 | VFPFJ_05479 | A0A179GUS7 | A0A179HHX7 | GTP-binding protein. | Curved DNA-binding protein. | 0.980 |
PCL_07312 | VFPFJ_07257 | A0A179GUS7 | A0A179HFR1 | GTP-binding protein. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.992 |
PCL_07312 | VFPFJ_10305 | A0A179GUS7 | A0A179GKB1 | GTP-binding protein. | Rsa4p. | 0.974 |
PCL_08249 | PCL_06034 | A0A179HHE2 | A0A179H035 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.695 |
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