Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VFPBJ_00959 | VFPBJ_05214 | A0A179HBV1 | A0A179HHB7 | SAGA-like transcriptional regulatory complex subunit Spt3. | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | 0.995 |
| VFPBJ_00959 | VFPBJ_10647 | A0A179HBV1 | A0A179G333 | SAGA-like transcriptional regulatory complex subunit Spt3. | Transcription initiation factor TFIID subunit 12. | 0.996 |
| VFPBJ_00959 | VFPFJ_00215 | A0A179HBV1 | A0A179HUP7 | SAGA-like transcriptional regulatory complex subunit Spt3. | Transcriptional activator (PtaC). | 0.713 |
| VFPBJ_00959 | VFPFJ_01469 | A0A179HBV1 | A0A179I0X1 | SAGA-like transcriptional regulatory complex subunit Spt3. | Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. | 0.937 |
| VFPBJ_00959 | VFPFJ_04386 | A0A179HBV1 | A0A179HJ02 | SAGA-like transcriptional regulatory complex subunit Spt3. | SAGA complex subunit Sgf29. | 0.995 |
| VFPBJ_00959 | VFPFJ_08061 | A0A179HBV1 | A0A179H6X2 | SAGA-like transcriptional regulatory complex subunit Spt3. | Histone acetylase complex subunit; Belongs to the PI3/PI4-kinase family. | 0.996 |
| VFPBJ_00959 | VFPFJ_09116 | A0A179HBV1 | A0A179H1B4 | SAGA-like transcriptional regulatory complex subunit Spt3. | Transcription initiation factor TFIID subunit. | 0.995 |
| VFPBJ_00959 | VFPFJ_09844 | A0A179HBV1 | A0A179GPE4 | SAGA-like transcriptional regulatory complex subunit Spt3. | Histone acetyltransferase subunit 3-like protein. | 0.995 |
| VFPBJ_00959 | VFPFJ_10227 | A0A179HBV1 | A0A179GKD7 | SAGA-like transcriptional regulatory complex subunit Spt3. | Protein (Fungal and plant). | 0.491 |
| VFPBJ_05214 | VFPBJ_00959 | A0A179HHB7 | A0A179HBV1 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | SAGA-like transcriptional regulatory complex subunit Spt3. | 0.995 |
| VFPBJ_05214 | VFPBJ_10647 | A0A179HHB7 | A0A179G333 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | Transcription initiation factor TFIID subunit 12. | 0.999 |
| VFPBJ_05214 | VFPFJ_00215 | A0A179HHB7 | A0A179HUP7 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | Transcriptional activator (PtaC). | 0.839 |
| VFPBJ_05214 | VFPFJ_01469 | A0A179HHB7 | A0A179I0X1 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. | 0.994 |
| VFPBJ_05214 | VFPFJ_04386 | A0A179HHB7 | A0A179HJ02 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | SAGA complex subunit Sgf29. | 0.978 |
| VFPBJ_05214 | VFPFJ_08061 | A0A179HHB7 | A0A179H6X2 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | Histone acetylase complex subunit; Belongs to the PI3/PI4-kinase family. | 0.998 |
| VFPBJ_05214 | VFPFJ_09116 | A0A179HHB7 | A0A179H1B4 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | Transcription initiation factor TFIID subunit. | 0.999 |
| VFPBJ_05214 | VFPFJ_09844 | A0A179HHB7 | A0A179GPE4 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | Histone acetyltransferase subunit 3-like protein. | 0.993 |
| VFPBJ_05214 | VFPFJ_10227 | A0A179HHB7 | A0A179GKD7 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | Protein (Fungal and plant). | 0.620 |
| VFPBJ_05214 | VFPFJ_10596 | A0A179HHB7 | A0A179GG39 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | MFS general substrate transporter. | 0.892 |
| VFPBJ_10647 | VFPBJ_00959 | A0A179G333 | A0A179HBV1 | Transcription initiation factor TFIID subunit 12. | SAGA-like transcriptional regulatory complex subunit Spt3. | 0.996 |
page 1 of 6