STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_10258Helicase swr1. (1718 aa)    
Predicted Functional Partners:
PCL_09254
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.995
VFPFJ_06917
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.995
VFPBJ_05226
Histone H2A; Belongs to the histone H2A family.
    
 0.994
VFPFJ_02572
Actin; Belongs to the actin family.
    
 
 0.987
VFPBJ_08508
Actin; Belongs to the actin family.
    
 0.985
VFPFJ_08654
SWR1-complex protein 4.
   
 0.977
PCL_01682
YL1 nuclear protein.
    
 0.966
PCL_08043
Histone acetyltransferase subunit (Yaf9).
    
 0.956
VFPBJ_07912
Actin.
    
 0.950
VFPFJ_08061
Histone acetylase complex subunit; Belongs to the PI3/PI4-kinase family.
   
 0.889
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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