Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PCL_01254 | VFPBJ_01005 | A0A179HRZ8 | A0A179H9L9 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Isopentenyl-diphosphate delta-isomerase, type 1. | 0.871 |
| PCL_01254 | VFPBJ_01858 | A0A179HRZ8 | A0A179HC72 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.587 |
| PCL_01254 | VFPBJ_01909 | A0A179HRZ8 | A0A179HE24 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Squalene monooxygenase. | 0.932 |
| PCL_01254 | VFPBJ_07517 | A0A179HRZ8 | A0A179H8C8 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | 0.810 |
| PCL_01254 | VFPBJ_08809 | A0A179HRZ8 | A0A179GH42 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Farnesyl-diphosphate farnesyltransferase. | 0.920 |
| PCL_01254 | VFPFJ_10183 | A0A179HRZ8 | A0A179GLB9 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.995 |
| VFPBJ_00542 | VFPBJ_01321 | A0A179HVD5 | A0A179HCL0 | RING finger protein. | Calmodulin A. | 0.542 |
| VFPBJ_00542 | VFPFJ_10183 | A0A179HVD5 | A0A179GLB9 | RING finger protein. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.730 |
| VFPBJ_01005 | PCL_01254 | A0A179H9L9 | A0A179HRZ8 | Isopentenyl-diphosphate delta-isomerase, type 1. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.871 |
| VFPBJ_01005 | VFPBJ_01909 | A0A179H9L9 | A0A179HE24 | Isopentenyl-diphosphate delta-isomerase, type 1. | Squalene monooxygenase. | 0.864 |
| VFPBJ_01005 | VFPBJ_07517 | A0A179H9L9 | A0A179H8C8 | Isopentenyl-diphosphate delta-isomerase, type 1. | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | 0.726 |
| VFPBJ_01005 | VFPBJ_08809 | A0A179H9L9 | A0A179GH42 | Isopentenyl-diphosphate delta-isomerase, type 1. | Farnesyl-diphosphate farnesyltransferase. | 0.817 |
| VFPBJ_01005 | VFPFJ_10183 | A0A179H9L9 | A0A179GLB9 | Isopentenyl-diphosphate delta-isomerase, type 1. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.661 |
| VFPBJ_01321 | VFPBJ_00542 | A0A179HCL0 | A0A179HVD5 | Calmodulin A. | RING finger protein. | 0.542 |
| VFPBJ_01321 | VFPFJ_10183 | A0A179HCL0 | A0A179GLB9 | Calmodulin A. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.763 |
| VFPBJ_01858 | PCL_01254 | A0A179HC72 | A0A179HRZ8 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.587 |
| VFPBJ_01858 | VFPBJ_01909 | A0A179HC72 | A0A179HE24 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Squalene monooxygenase. | 0.710 |
| VFPBJ_01858 | VFPBJ_08809 | A0A179HC72 | A0A179GH42 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Farnesyl-diphosphate farnesyltransferase. | 0.655 |
| VFPBJ_01858 | VFPFJ_10183 | A0A179HC72 | A0A179GLB9 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.627 |
| VFPBJ_01909 | PCL_01254 | A0A179HE24 | A0A179HRZ8 | Squalene monooxygenase. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.932 |
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