Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_02798 | VFPBJ_01025 | A0A179HMJ5 | A0A179HWP7 | Ubiquitin carboxyl-terminal hydrolase. | DNA-binding protein creA. | 0.630 |
PCL_02798 | VFPBJ_06826 | A0A179HMJ5 | A0A179HUI4 | Ubiquitin carboxyl-terminal hydrolase. | Catabolite repression protein creC. | 0.995 |
PCL_02798 | VFPBJ_06828 | A0A179HMJ5 | A0A179GLE4 | Ubiquitin carboxyl-terminal hydrolase. | Arrestin domain-containing protein. | 0.618 |
PCL_02798 | VFPBJ_09390 | A0A179HMJ5 | A0A179GC73 | Ubiquitin carboxyl-terminal hydrolase. | E3 ubiquitin-protein ligase. | 0.629 |
PCL_02798 | VFPFJ_06944 | A0A179HMJ5 | A0A179HG87 | Ubiquitin carboxyl-terminal hydrolase. | Origin recognition complex subunit 6 (ORC6) domain-containing protein. | 0.445 |
PCL_06251 | VFPBJ_06828 | A0A179GTK7 | A0A179GLE4 | Elongation factor Tu GTP binding domain-containingprotein. | Arrestin domain-containing protein. | 0.431 |
VFPBJ_01025 | PCL_02798 | A0A179HWP7 | A0A179HMJ5 | DNA-binding protein creA. | Ubiquitin carboxyl-terminal hydrolase. | 0.630 |
VFPBJ_01025 | VFPBJ_06826 | A0A179HWP7 | A0A179HUI4 | DNA-binding protein creA. | Catabolite repression protein creC. | 0.661 |
VFPBJ_01025 | VFPBJ_06828 | A0A179HWP7 | A0A179GLE4 | DNA-binding protein creA. | Arrestin domain-containing protein. | 0.624 |
VFPBJ_01025 | VFPBJ_09360 | A0A179HWP7 | A0A179GSU9 | DNA-binding protein creA. | Non-specific serine/threonine protein kinase. | 0.787 |
VFPBJ_01025 | VFPBJ_09390 | A0A179HWP7 | A0A179GC73 | DNA-binding protein creA. | E3 ubiquitin-protein ligase. | 0.514 |
VFPBJ_06826 | PCL_02798 | A0A179HUI4 | A0A179HMJ5 | Catabolite repression protein creC. | Ubiquitin carboxyl-terminal hydrolase. | 0.995 |
VFPBJ_06826 | VFPBJ_01025 | A0A179HUI4 | A0A179HWP7 | Catabolite repression protein creC. | DNA-binding protein creA. | 0.661 |
VFPBJ_06826 | VFPBJ_06828 | A0A179HUI4 | A0A179GLE4 | Catabolite repression protein creC. | Arrestin domain-containing protein. | 0.675 |
VFPBJ_06826 | VFPBJ_09390 | A0A179HUI4 | A0A179GC73 | Catabolite repression protein creC. | E3 ubiquitin-protein ligase. | 0.615 |
VFPBJ_06826 | VFPFJ_06944 | A0A179HUI4 | A0A179HG87 | Catabolite repression protein creC. | Origin recognition complex subunit 6 (ORC6) domain-containing protein. | 0.410 |
VFPBJ_06828 | PCL_02798 | A0A179GLE4 | A0A179HMJ5 | Arrestin domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase. | 0.618 |
VFPBJ_06828 | PCL_06251 | A0A179GLE4 | A0A179GTK7 | Arrestin domain-containing protein. | Elongation factor Tu GTP binding domain-containingprotein. | 0.431 |
VFPBJ_06828 | VFPBJ_01025 | A0A179GLE4 | A0A179HWP7 | Arrestin domain-containing protein. | DNA-binding protein creA. | 0.624 |
VFPBJ_06828 | VFPBJ_06826 | A0A179GLE4 | A0A179HUI4 | Arrestin domain-containing protein. | Catabolite repression protein creC. | 0.675 |
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