STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_10131Succinate-semialdehyde dehydrogenase NADP; Belongs to the aldehyde dehydrogenase family. (479 aa)    
Predicted Functional Partners:
VFPBJ_01285
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.969
VFPFJ_03745
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase.
     
  0.909
VFPFJ_03392
HpcH/HpaI aldolase/citrate lyase family protein.
     
  0.909
VFPFJ_09130
Succinate-semialdehyde dehydrogenase.
  
  
 
0.902
VFPBJ_01360
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
 0.871
VFPFJ_10597
2-oxoglutarate dehydrogenase E1 component, mitochondrial.
   
 
 0.866
VFPBJ_02728
2-oxoglutarate dehydrogenase E1 component, mitochondrial.
   
 
 0.866
VFPBJ_05438
Citrate synthase; Belongs to the citrate synthase family.
  
 0.862
VFPFJ_06210
Citrate synthase; Belongs to the citrate synthase family.
  
 0.862
VFPBJ_03140
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.859
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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