STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPBJ_05492Intracellular protein transport protein (Sat1). (678 aa)    
Predicted Functional Partners:
VFPFJ_03306
RIC1 domain-containing protein.
    
 0.989
VFPBJ_05843
Exportin-1.
 
      0.896
VFPBJ_10250
RAS small monomeric GTPase Rab6.
    
 0.822
VFPBJ_05536
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
 
      0.721
VFPBJ_00624
Vps52 / Sac2 family protein.
     
 0.706
PCL_10375
GARP complex subunit Vps53.
     
 0.700
VFPFJ_03806
RNA helicase/RNAse III; Belongs to the helicase family. Dicer subfamily.
 
      0.691
VFPFJ_08002
GARP complex component.
     
 0.682
VFPBJ_03994
Oligomeric golgi complex component.
    
 0.674
VFPBJ_05611
Maintenance of ploidy protein mob1.
 
      0.672
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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