Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PCL_04726 | VFPBJ_01243 | A0A179HIG3 | A0A179HCK9 | Topisomerase II associated protein. | Uncharacterized protein. | 0.972 |
| PCL_04726 | VFPBJ_03892 | A0A179HIG3 | A0A179H6R2 | Topisomerase II associated protein. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.864 |
| PCL_04726 | VFPBJ_10323 | A0A179HIG3 | A0A179HQ83 | Topisomerase II associated protein. | Dcp1-like decapping. | 0.969 |
| PCL_04726 | VFPFJ_07987 | A0A179HIG3 | A0A179H756 | Topisomerase II associated protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.978 |
| PCL_04726 | VFPFJ_09915 | A0A179HIG3 | A0A179GQL0 | Topisomerase II associated protein. | NUDIX hydrolase domain-containingprotein. | 0.606 |
| PCL_09809 | VFPFJ_07987 | A0A179GGU1 | A0A179H756 | 40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.468 |
| PCL_09809 | VFPFJ_09915 | A0A179GGU1 | A0A179GQL0 | 40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. | NUDIX hydrolase domain-containingprotein. | 0.851 |
| SLX4 | VFPFJ_09915 | A0A179GQ59 | A0A179GQL0 | Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. | NUDIX hydrolase domain-containingprotein. | 0.873 |
| VFPBJ_01159 | VFPFJ_09915 | A0A179HCD3 | A0A179GQL0 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. | NUDIX hydrolase domain-containingprotein. | 0.503 |
| VFPBJ_01243 | PCL_04726 | A0A179HCK9 | A0A179HIG3 | Uncharacterized protein. | Topisomerase II associated protein. | 0.972 |
| VFPBJ_01243 | VFPBJ_10323 | A0A179HCK9 | A0A179HQ83 | Uncharacterized protein. | Dcp1-like decapping. | 0.981 |
| VFPBJ_01243 | VFPFJ_07987 | A0A179HCK9 | A0A179H756 | Uncharacterized protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.867 |
| VFPBJ_01243 | VFPFJ_09915 | A0A179HCK9 | A0A179GQL0 | Uncharacterized protein. | NUDIX hydrolase domain-containingprotein. | 0.501 |
| VFPBJ_03892 | PCL_04726 | A0A179H6R2 | A0A179HIG3 | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | Topisomerase II associated protein. | 0.864 |
| VFPBJ_03892 | VFPBJ_10323 | A0A179H6R2 | A0A179HQ83 | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | Dcp1-like decapping. | 0.951 |
| VFPBJ_03892 | VFPFJ_07987 | A0A179H6R2 | A0A179H756 | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.649 |
| VFPBJ_03892 | VFPFJ_09915 | A0A179H6R2 | A0A179GQL0 | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | NUDIX hydrolase domain-containingprotein. | 0.501 |
| VFPBJ_05575 | VFPFJ_09915 | A0A179GRL5 | A0A179GQL0 | Tetracycline efflux protein. | NUDIX hydrolase domain-containingprotein. | 0.581 |
| VFPBJ_09040 | VFPFJ_09915 | A0A179GGV7 | A0A179GQL0 | Alpha-ketoglutarate-dependent sulfonate dioxygenase. | NUDIX hydrolase domain-containingprotein. | 0.753 |
| VFPBJ_10323 | PCL_04726 | A0A179HQ83 | A0A179HIG3 | Dcp1-like decapping. | Topisomerase II associated protein. | 0.969 |
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