STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_09693Pseudouridine synthase. (519 aa)    
Predicted Functional Partners:
VFPBJ_06739
Cytidine and deoxycytidylate deaminase zinc-binding region.
  
 
 0.901
VFPFJ_05590
Pseudouridine synthase TruD/Pus7.
    
 
 0.851
VFPFJ_08194
50S ribosome-binding GTPase domain-containing protein.
  
 
 0.752
VFPFJ_08721
SpoU_sub_bind domain-containing protein.
  
 
 0.744
PCL_05640
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.699
PCL_02191
60S ribosomal protein L19; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.699
VFPFJ_08643
Ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.690
PCL_05627
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
   0.685
PCL_03128
Ribosomal protein L26.
   
   0.679
PCL_02754
GTP binding protein (EngB).
   
 
 0.678
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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