STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPBJ_04564Ro-7-like protein; Belongs to the actin family. (552 aa)    
Predicted Functional Partners:
VFPFJ_05924
Dynactin Arp1 p62 subunit RO2.
   
 0.994
VFPBJ_04159
Dynactin subunit.
   
 0.994
PCL_01221
Trimeric LpxA-like protein.
   
 0.994
VFPFJ_04491
Dynactin subunit p25.
    
 0.990
VFPFJ_06914
Dynactin.
    
 0.986
VFPFJ_03386
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.949
PCL_05372
Actin-1; Belongs to the actin family.
    
 0.942
VFPBJ_07912
Actin.
    
0.936
VFPFJ_03773
Seryl-tRNA synthetase.
 
      0.899
PCL_07506
Cytoplasmic dynein 1 intermediate chain 2.
   
 0.897
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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