Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VFPBJ_01266 | VFPBJ_05974 | A0A179HAB5 | A0A179GTC1 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Tryptophan synthase. | 0.999 |
VFPBJ_01266 | VFPBJ_10175 | A0A179HAB5 | A0A179H0H9 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | High-affinity methionine permease. | 0.662 |
VFPBJ_05974 | VFPBJ_01266 | A0A179GTC1 | A0A179HAB5 | Tryptophan synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.999 |
VFPBJ_05974 | VFPBJ_10175 | A0A179GTC1 | A0A179H0H9 | Tryptophan synthase. | High-affinity methionine permease. | 0.461 |
VFPBJ_10175 | VFPBJ_01266 | A0A179H0H9 | A0A179HAB5 | High-affinity methionine permease. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.662 |
VFPBJ_10175 | VFPBJ_05974 | A0A179H0H9 | A0A179GTC1 | High-affinity methionine permease. | Tryptophan synthase. | 0.461 |
VFPBJ_10175 | VFPFJ_11308 | A0A179H0H9 | A0A179FEJ3 | High-affinity methionine permease. | Methyltransferase. | 0.424 |
VFPFJ_11308 | VFPBJ_10175 | A0A179FEJ3 | A0A179H0H9 | Methyltransferase. | High-affinity methionine permease. | 0.424 |