STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPBJ_10094Ureidoglycolate hydrolase. (249 aa)    
Predicted Functional Partners:
VFPBJ_10216
mRNA-nucleus export ATPase (Elf1).
   
   0.989
VFPFJ_05990
Elongation factor 3.
   
   0.989
PCL_01654
60S ribosomal protein L23a.
  
 0.948
PCL_03128
Ribosomal protein L26.
   
 0.944
VFPFJ_06868
Allantoicase.
  
 
 0.944
PCL_00261
Ribosomal protein L14.
   
 0.941
VFPFJ_00134
Allantoicase.
  
 
 0.939
PCL_07744
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.930
PCL_10251
Ribosomal protein L31e.
   
 0.928
PCL_12561
60S ribosomal protein L24.
   
 0.928
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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