STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPBJ_03266Small GTPase superfamily, ARF type; Belongs to the small GTPase superfamily. Arf family. (180 aa)    
Predicted Functional Partners:
VFPFJ_07855
Uncharacterized protein.
   
 0.984
VFPBJ_10635
Cytoskeletal-regulatory complex EF hand domain-containing protein.
    
 0.937
VFPBJ_10250
RAS small monomeric GTPase Rab6.
   
 0.930
VFPBJ_01934
Rho GTPase activator Rga.
    
 0.925
PCL_06189
Guanyl-nucleotide exchange factor (Sec7).
    
 0.901
VFPFJ_10329
BZIP transcription factor.
   
 
 0.793
VFPBJ_00552
SNARE domain-containing protein; Belongs to the syntaxin family.
    
 0.772
VFPFJ_01856
Sec7 domain-containing protein.
    
 0.764
VFPBJ_10284
Sec7 domain-containingprotein.
    
 0.734
VFPFJ_01059
Arf gtpase-activating protein.
   
 0.730
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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