STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_08015Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family. (347 aa)    
Predicted Functional Partners:
VFPBJ_01005
Isopentenyl-diphosphate delta-isomerase, type 1.
 
 
 0.989
PCL_06043
Geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.983
VFPBJ_08809
Farnesyl-diphosphate farnesyltransferase.
  
 0.981
VFPFJ_07039
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.976
PCL_10912
Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
    
 0.970
VFPFJ_08069
Hexaprenyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.970
VFPBJ_06099
Protein farnesyltransferase.
     
 0.964
VFPFJ_02822
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.957
VFPFJ_03359
Di-trans,poly-cis-decaprenylcistransferase.
  
 
 0.951
PCL_03029
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.810
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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